Blog
Biological Role of GLP-1
Glucagon-like peptide-1 (GLP-1) is a critical hormone in the regulation of glucose metabolism and has garnered significant attention due to its therapeutic potential in managing diabetes and obesity. Understanding the biological role of GLP-1 provides insights into its mechanisms of action and its impact on various physiological processes.Introduction to GLP-1GLP-1 is an incretin hormone primarily produced in the L-cells of the small intestine in response to food intake. It plays a pivotal role in enhancing insulin secretion from the pancreas, a process crucial for maintaining glucose homeostasis. GLP-1 is derived from the proglucagon gene and exists in two main forms, GLP-1(7-37) and GLP-1(7-36)amide, both of which are biologically active.Mechanisms of ActionInsulin Secretion
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20th Jun 2024
p38 MAPK Signaling Review
The p38 MAPK signaling pathway is an intracellular signaling pathway that plays a crucial role in cellular responses to various stressors and inflammatory stimuli. It is a part of the larger MAPK superfamily, which also includes ERK and JNK pathways. The p38 MAPK pathway is involved in regulating a wide range of cellular processes, including cell proliferation, differentiation, apoptosis, inflammation, and immune responses. Key Takeaways: p38 MAPK, part of the MAPK family, is key in cellular responses to stress and inflammation. This pathway regulates cell processes like proliferation, differentiation, apoptosis, and immune responses. The MAPK family includes ERKs, JNKs, and p38 MAPKs, each responding to different stimuli. p38 MAPK has four isoforms, each with specific roles i
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1st Feb 2024
Apoptosis (Intrinsic & Extrinsic Pathways)
At Assay Genie we have created a comprehensive guide outlining everything you need to know about apoptosis! Key Takeaways: Apoptosis is a programmed cell death process, vital for tissue maintenance and disease prevention. Distinct from necrosis, apoptosis involves cellular shrinkage, nuclear breakdown, membrane disruption, and fragmentation into apoptotic bodies. p53 pathway, intrinsic and extrinsic pathways, and caspase cascades are key mechanisms in apoptosis. Apoptosis vs. Necrosis: Apoptosis is controlled and natural, while necrosis is uncontrolled and harmful. p53 Pathway: Activated by DNA damage, involves proteins like Bax, Bak, Bad. Intrinsic Apoptosis: Triggered internally by cellular stress; extrinsic by external signals. Caspases: Crucial enzymes for apoptosis exec
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24th Jan 2024
Serum vs. Plasma: A Deep Dive into Their Molecular Makeup and Implications for ELISA
Blood plasma and serum are essential components of blood and have distinct molecular compositions and uses in the medical and research fields. This article aims to elucidate the differences between serum and plasma and respond to the most frequently asked questions. Key Takeaways: Serum is blood fluid without clotting factors; plasma contains these factors. They're crucial in medical research, including ELISA, to measure various analytes. Different collection methods are used for serum and plasma. What is Serum vs Plasma? Blood consists of red and white cells, platelets, and a liquid portion, known as plasma. When blood is collected and coagulates, the solid components, such as fibrin and blood cells, are separated, leaving a clear yellowish fluid known as serum. In
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24th Jan 2024
43 Science Instagrams You Need To Follow: The Instagram Influencer-Ome
Social media has become a powerful tool for science communication, and Instagram is no exception. The platform is home to a diverse array of science influencers, ranging from PhD students to established researchers and science communicators. From immunology to ecology, genetics to neurology, there's an Instagram account out there for every science enthusiast. In this article, we've curated a list of 43 science Instagram accounts that you need to follow to stay informed and inspired. Key Takeaways: Discover groundbreaking insights from 43 science influencers on Instagram. Delve into diverse research areas, including neuroscience, ecology, and biochemistry. Gain educational content, advice, and updates from PhD students to expert researchers. Find Instagram accounts for every
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24th Jan 2024
AI Abstract Generator
Revolutionizing Research with AI Abstract Generator Explore how GPT can help in generating scientific abstracts based on figure legends and data. Discover the potential of AI in scientific literature.
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AI Abstract Generator in Action, example of an abstract in PNAS and a version generated by the AI tool. In a world of ever-expanding scientific literature, staying abreas
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20th Nov 2023
CXCL16 – Review
CXCL16
CXCL16, a unique member of the CXC chemokine family, stands at the crossroads of immune modulation and vascular biology. Initially discovered as a chemokine, CXCL16 operates beyond its chemotactic role by serving as a transmembrane protein that can bind to its receptor, CXCR6. This dual functionality endows CXCL16 with the ability to regulate immune cell trafficking, particularly those expressing CXCR6, and to participate in diverse physiological processes such as inflammation, atherosclerosis, and tissue repair. CXCL16's intriguing capacity to bridge immune responses with vascular dynamics underscores its significance as a multifaceted player in both immune surveillance and tissue integrity maintenance.
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15th Aug 2023
CV writing tips for scientists
Making the switch!
This article provides some help on CV writing tips for scientists for PhDs and PostDocs looking for jobs outside of academia and what they might need to add to their CV to improve it for a business orientated position.
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11th Aug 2023
Natural Killer Cells: A Guide
What are Natural Killer Cells?
Natural Killer (NK) cells are a vital subset of lymphocytes, belonging to the same family as B cells and T cells, collectively known as lymphocytes. They play a crucial role in the innate immune system, providing a rapid response against infected or cancerous cells without prior exposure or activation. NK cells are named "natural" because they can directly recognize and kill target cells without the need for prior sensitization or antigen presentation.
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28th Jul 2023
Research Universities in Ireland
Since I am from Ireland I thought I would give as comprehensive view as possible for Research Universities in Ireland. By now you are probably considering looking for a PhD or PostDoc position in Ireland which is a great start. Known as the Land of the scholars,there are 10 international standard Research Universities in Ireland and colleges that focus on a range of life science, chemistry, physics and engineering research.
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6th Jul 2023
Transformation Protocol – Sample Transformation Protocols
Introduction Transformation of bacteria with plasmids is not only of note for bacterial studies but also can be used for gene expression studies in mammalian cells. Most plasmids are of bacterial origin and contain both a bacterial origin of replication and an antibiotic resistance gene which can be used as a selectable marker. The process of transformation allows foreign DNA to be introduced into a cell. Genetic modifications can be made to various bacterial strains to make them more amenable to transformation. Such modifications will maintain the plasmid without rearranging the plasmid DNA. Certain treatments have been shown to increase the transformation efficiency of bacteria. These treatments make them more susceptible to either chemical or electrical based transformation,
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27th Jun 2023
Mycoplasma in Cell Culture Detection Guide
As a PhD student delving deep into the realm of cellular biology, there is one antagonist that consistently challenges my research: mycoplasma. This microscopic bacterium, with its ability to invisibly infiltrate and undermine cell cultures, has become a persistent foe. However, understanding the intricacies of this bacterial contaminant is the first step towards effective mitigation.
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28th May 2023
Beta Oxidation of Fatty Acids
Understanding Beta-Oxidation: A Comprehensive Overview Fatty acids provide a highly efficient energy storage mechanism, delivering more energy per gram than common carbohydrates like glucose. This becomes particularly vital in tissues with high energy requirements, such as the heart, where 50–70% of energy is derived from fatty acid beta-oxidation. During this process, long-chain acyl-CoA molecules, the main components of fatty acids, are broken down into acetyl-CoA molecules. Key Takeaways: Beta-oxidation is a metabolic process breaking down fatty acids for energy. It occurs primarily in mitochondria and involves four critical steps. Beta-oxidation generates acetyl-CoA, NADH, and FADH2 for ATP production. It's vital for energy supply, especially in tissues like
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28th May 2023
Sci-Hub: Your Proxy to Unrestricted Knowledge
Introduction to Sci-Hub In the realm of science and academia, one name has been echoing in every corner of the globe, Sci-Hub. Created by Alexandra Elbakyan, a Kazakhstani computer scientist, Sci-Hub is considered the most controversial yet revolutionary project in modern science. Since its inception in 2011, it has become a beacon of hope for millions of students, researchers, medical professionals, journalists, and curious minds across the globe​1​.
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The Mission of Sci-Hub Sci-Hub emerged as a protest against the high prices of academic journals and books locked behind paywalls. Its m
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25th May 2023
OKRs for Researchers
Objectives & Key Results
Objectives & Key Results (OKRs) is a framework for setting and tracking goals. At Assay Genie, we've tailored this approach to suit research. Explore our OKR for Researchers presentation, get practical advice from our video, and apply this framework to your research with our downloadable OKR worksheet!
OKR Pack!
Download
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25th May 2023
23 PhD Interview tips
PhD Interview Presentation Dos and Don’ts
It is becoming increasingly common for master's and undergraduate students to present data they produced during their research as part of the PhD interview process. This may involve presenting to the potential lab, professor, or department interview panel responsible for evaluating candidates. The aim of this is to understand what basic skills and understanding the potential PhD candidate already has about the field or a scientific topic in general. For many this is a great opportunity to impress and may allow applicants to rise above competing applicants that may have the grades on paper but do not have the drive, experience or skills to carry out a PhD in a specific l
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14th Apr 2023
Tips for Writing a Thesis Statement
Writing a Thesis Statement
Writing a thesis statement can be a frustrating task, whether you're working on your undergraduate, master's, or PhD degree. Unfortunately, many teachers and professors don't provide clear examples of what a good thesis statement looks like or what elements it should include. If you're struggling to write your thesis statement, this blog post offers some helpful tips to consider. Plus, we've included a worksheet to help you improve your skills. Whether you're just starting out or finishing up your thesis, these resources can help you craft a strong and effective thesis statement.
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14th Apr 2023
29 PhD Thesis Writing Tips
Explore 29 essential tips for crafting a compelling and well-structured PhD thesis, blending effective writing practices with time management and academic rigor for a successful dissertation journey. Be sure to check out some of our other PhD/Post Doc related resources. Key Takeaways: Incorporate 29 effective strategies for efficient and impactful PhD thesis writing. Embrace practical tips like writing drafts, managing time, and utilizing technology for smoother writing. Understand the importance of regular breaks, setting goals, and seeking feedback for continuous improvement. Recognize the value of maintaining academic rigor and clarity throughout the thesis. 29 PhD Thesis Writing Tips 1. Write Now, Edit Later Putting words on paper and not editing them
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5th Apr 2023
Renal and Hepatic Function Assays
Hepatic Function Assays
Liver function assays are a suite of tests designed to assess the health and efficacy of our vital organ: The liver. This hardworking powerhouse is responsible for creating bile, eliminating toxins, and breaking down fats, carbohydrates and proteins – all necessary elements that keep us ticking!
To evaluate the liver's health, there are various hepatic function assays that can be performed. These tests measure the organ's capacity to produce bile, metabolize toxins and drugs, as well as synthesize proteins and carbohydrates. By assessing these three factors of liver performance with an assay test, physicians gain valuable insights into how their patient’s livers are functioning
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7th Mar 2023
Enhancing Cancer Research: Syngeneic Mouse Models and Immune Checkpoint Inhibitors
Enhancing Cancer Research: Syngeneic Mouse Models and Immune Checkpoint Inhibitors A quick guide to Syngeneic Mouse Models Syngeneic Mouse Models Cancer research has seen remarkable advancements in recent years, largely due to the development of novel therapeutic approaches such as immune checkpoint inhibitors (ICIs). Among the various preclinical models used in cancer research, syngeneic mouse models have emerged as indispensable tools for studying the tumor microenvironment and evaluating immunotherapeutic strategies. In this article, we will delve into the significance of syngeneic mouse models in cancer research, particularly focusing on their role in the study of immune checkpoint inhibitors. Understanding Immune Checkpoints Immune checkpoints are regu
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25th Jan 2023
ILC2: The Immune Cell That Fights Allergies and Infections
ILC2 - Function, Cytokines, and Role in Health and Disease
A quick guide to IL2C
Our immune system is composed of various types of cells that work together to protect us from harmful pathogens, such as viruses and bacteria. One type of immune cell that has recently gained attention is the innate lymphoid cell type 2 (ILC2). ILC2s are a type of white blood cell that play a critical role in protecting us against infections and allergies. In this article, we will explore what ILC2s are, their function, and their role in health and disease.
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25th Jan 2023
Flow Cytometry Protocol | 10 Hints & Tips
Flow Cytometry Protocol
The meaning is in the name:
Flow = in motion, Cyto = cells, Metry = measure.
What is Flow Cytometry?
Flow cytometry measures the properties of cells while in a fluid stream. It enables single cell analysis of complex cellular systems (e.g. blood) very rapidly (100s of cells/second) it also allows you to look at various cellular properties such as size, granularity, fluorescence intensity per cell.
Flow Cytometry can be used for cell counting, cell sorting, biomarker detection and protein engineering. Ce
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7th Nov 2022
Guide to Fluorescence Activated Cell Sorting (FACs): The Latest Technology in Cell Separation
Fluorescence activated cell sorting (FACS) is a cutting-edge technique used to isolate individual cells from a sample and analyse their properties. In this guide, we will discuss the basics of FACS sorting protocol and how it can be used in a variety of applications. FACS is revolutionizing the field of cell biology and allowing researchers to isolate single cells with an unprecedented accuracy of 99.99%. This makes it an ideal tool for applications where cell purity is important. Key Takeaways FACS enables precise isolation and analysis of individual cells with an accuracy of 99.99%. It uses fluorescent dyes and flow cytometry to sort cells based on various parameters, including size, surface markers, and fluorescence intensity. FACS finds applicatio
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26th Jul 2022
EGF Family
Epidermal Growth Factor (EGF) is a protein that stimulates cell growth and differentiation by binding to its receptor epidermal growth factor receptor (EGFR) which triggers ligand-induced dimerization which activates the intrinsic protein-tyrosine kinase activity of EGFR. This in turn initiates a signal transduction cascade that results in various biochemical changes within the cell being targeted by EGF. This ultimately leads to DNA synthesis and cell proliferation. Members of this protein family are all similar due to their shared structural and functional characteristics.
Each member of the EGF family have at least one common structural motif, the EGF domain, which is characterised by six conserved cysteine residues forming three disulphide bonds. Family members include EGF,
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23rd May 2022